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We welcome interested applicants to the lab and will consider talented scientists at all levels of their careers. Postdoctoral Scholars Prospective postdoctoral applicants should send a cover letter with a brief discussion of research background, questions of interest to pursue during the...

Systematic Genetic Screen for Transcriptional Regulators of the Candida albicans White-Opaque Switch

Publication: Journal Article

Lohse, Matthew B, Iuliana Ene V, Veronica B Craik, Aaron D Hernday, Eugenio Mancera, Joachim Morschhäuser, Richard J Bennett, and Alexander D Johnson. 2016. “Systematic Genetic Screen for Transcriptional Regulators of the Candida Albicans White-Opaque Switch”. Genetics 203 (4): 1679-92.

The transcriptomes of two heritable cell types illuminate the circuit governing their differentiation

Publication: Journal Article

Tuch, Brian B, Quinn M Mitrovich, Oliver R Homann, Aaron D Hernday, Cinna K Monighetti, Francisco M De La Vega, and Alexander D Johnson. 2010. “The Transcriptomes of Two Heritable Cell Types Illuminate the Circuit Governing Their Differentiation”. PLoS Genet 6 (8): e1001070.

Contact-dependent inhibition of growth in Escherichia coli

Publication: Journal Article

Aoki, Stephanie K, Rupinderjit Pamma, Aaron D Hernday, Jessica E Bickham, Bruce A Braaten, and David A Low. 2005. “Contact-Dependent Inhibition of Growth in Escherichia Coli”. Science 309 (5738): 1245-8.

The Roles of Chromatin Accessibility in Regulating the Candida albicans White-Opaque Phenotypic Switch

Publication: Journal Article

Qasim, Mohammad N, Ashley Valle Arevalo, Clarissa J Nobile, and Aaron D Hernday. 2021. “The Roles of Chromatin Accessibility in Regulating the Candida Albicans White-Opaque Phenotypic Switch”. J Fungi (Basel) 7 (1).

Epigenetic cell fate in Candida albicans is controlled by transcription factor condensates acting at super-enhancer-like elements

Publication: Journal Article

Frazer, Corey, Mae I Staples, Yoori Kim, Matthew Hirakawa, Maureen A Dowell, Nicole Johnson V, Aaron D Hernday, et al. 2020. “Epigenetic Cell Fate in Candida Albicans Is Controlled by Transcription Factor Condensates Acting at Super-Enhancer-Like Elements”. Nat Microbiol 5 (11): 1374-89.

Whole RNA-Sequencing and Transcriptome Assembly of Candida albicans and Candida africana under Chlamydospore-Inducing Conditions

Publication: Journal Article

Giosa, Domenico, Maria Rosa Felice, Travis J Lawrence, Megha Gulati, Fabio Scordino, Letterio Giuffrè, Carla Lo Passo, et al. 2017. “Whole RNA-Sequencing and Transcriptome Assembly of Candida Albicans and Candida Africana under Chlamydospore-Inducing Conditions”. Genome Biol Evol 9 (7): 1971-77.

Candida albicans white and opaque cells undergo distinct programs of filamentous growth

Publication: Journal Article

Si, Haoyu, Aaron D Hernday, Matthew P Hirakawa, Alexander D Johnson, and Richard J Bennett. 2013. “Candida Albicans White and Opaque Cells Undergo Distinct Programs of Filamentous Growth”. PLoS Pathog 9 (3): e1003210.

White-opaque switching in natural MTLa/α isolates of Candida albicans: evolutionary implications for roles in host adaptation, pathogenesis, and sex

Publication: Journal Article

Xie, Jing, Li Tao, Clarissa J Nobile, Yaojun Tong, Guobo Guan, Yuan Sun, Chengjun Cao, et al. 2013. “White-Opaque Switching in Natural MTLa/α Isolates of Candida Albicans: Evolutionary Implications for Roles in Host Adaptation, Pathogenesis, and Sex”. PLoS Biol 11 (3): e1001525.

A recently evolved transcriptional network controls biofilm development in Candida albicans

Publication: Journal Article

Nobile, Clarissa J, Emily P Fox, Jeniel E Nett, Trevor R Sorrells, Quinn M Mitrovich, Aaron D Hernday, Brian B Tuch, David R Andes, and Alexander D Johnson. 2012. “A Recently Evolved Transcriptional Network Controls Biofilm Development in Candida Albicans”. Cell 148 (1-2): 126-38.